Phylogeny Validation for Some Egyptian Brassicaceae Endemic Species
Abdelhady, Shaimaa; Salam, Aly; Abu Shady, Asmaa; Sharaf, Abdoallah; Solimann, Khaled;
Abstract
A crucial menace for the biodiversity in
arid and semi-arid territories is the global
warming arising from anthropogenic activity.
Egypt is expected to undergo an acute rainfall
decrease and temperature boost in the next few
decades, leading to many plant species' geographical
allocation. Endemic plants of pleiotropic
economic importance are strongly affected
by climate change prospects, which will
gradually result in losing our plant wealth genetic
resources. Due to few studies on the
Egyptian Brassicaceae family which has an
economically and medicinally importance due
to the presence of many active compounds that
are included, in the pharmaceutical and cosmetic
components (e.g., glucosinolates) besides
having a large amount of antioxidant
which inhibit the growth of microbes and also
treat rheumatic diseases. The identification of
this family still kind of fishy as researchers
mostly relies on the morphological characters.
To globally sustain this Egyptian plant family
wealth's genetic pattern, it is substantial to
characterize them based on their authenticated
genetic background. Here we present a phylogenetic
analysis of 16 species of the Egyptian
Brassicaceae family using two plastid coding
genes; Ribulose-1,5- bisphosphate carboxylase
oxygenase (rbcL-a) and maturase K
(matK). The maximum likelihood of the two
markers for our samples was concordant with
the Brassicaceae's references-sequences,
which exist on plastid are considered highly
conserved biomarkers. In conclusion, we have
generated a robust phylogeny tree based on the
molecular level that validates the Egyptian
plant species and reliably differentiates them
on morphological identification. This study is
considered the first phase of Egyptian Brassicaceae
family species authentication followed
by biochemical studies serving the pharmacological
and medicinal fields.
arid and semi-arid territories is the global
warming arising from anthropogenic activity.
Egypt is expected to undergo an acute rainfall
decrease and temperature boost in the next few
decades, leading to many plant species' geographical
allocation. Endemic plants of pleiotropic
economic importance are strongly affected
by climate change prospects, which will
gradually result in losing our plant wealth genetic
resources. Due to few studies on the
Egyptian Brassicaceae family which has an
economically and medicinally importance due
to the presence of many active compounds that
are included, in the pharmaceutical and cosmetic
components (e.g., glucosinolates) besides
having a large amount of antioxidant
which inhibit the growth of microbes and also
treat rheumatic diseases. The identification of
this family still kind of fishy as researchers
mostly relies on the morphological characters.
To globally sustain this Egyptian plant family
wealth's genetic pattern, it is substantial to
characterize them based on their authenticated
genetic background. Here we present a phylogenetic
analysis of 16 species of the Egyptian
Brassicaceae family using two plastid coding
genes; Ribulose-1,5- bisphosphate carboxylase
oxygenase (rbcL-a) and maturase K
(matK). The maximum likelihood of the two
markers for our samples was concordant with
the Brassicaceae's references-sequences,
which exist on plastid are considered highly
conserved biomarkers. In conclusion, we have
generated a robust phylogeny tree based on the
molecular level that validates the Egyptian
plant species and reliably differentiates them
on morphological identification. This study is
considered the first phase of Egyptian Brassicaceae
family species authentication followed
by biochemical studies serving the pharmacological
and medicinal fields.
Other data
| Title | Phylogeny Validation for Some Egyptian Brassicaceae Endemic Species | Authors | Abdelhady, Shaimaa ; Salam, Aly; Abu Shady, Asmaa; Sharaf, Abdoallah; Solimann, Khaled | Keywords | Endemic plants; RbcL-a; MatK; DNA Barcoding; Phylogenetic analysis | Issue Date | May-2021 | Journal | Arab Universities Journal of Agricultural Science. | Volume | 29 | Issue | 1 | Start page | 387 | End page | 399 | ISSN | 2636-3585 | DOI | 10.21608/ajs.2021.49712.1298 |
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| Phylogeny_Validation_for_Some_Egyptian_Brassicacea.pdf | 615.9 kB | Adobe PDF | Request a copy | |
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